Caelestium genus novum (Polygonaceae): обоснование, представленное по результатам молекулярно-филогенетических анализов трибы Polygoneae, предпринятых с учетом вторичной структуры локусов ITS1 и ITS2 ядерной рибосомной ДНК

Adanson M. 1763. Familles des plantes. T. 2. Paris: Vincent. 640 p. https://doi.org/10.5962/bhl.title.271

Albach D. C., Chase M. W. 2004. Incongruence in Veroniceae (Plantaginaceae): evidence from two plastid and a nuclear ribosomal DNA region // Molec. Phylogen. Evol. Vol. 32, iss. 1. P. 183–197. https://doi.org/10.1016/j.ympev.2003.12.001

Álvarez I., Wendel J. F. 2003. Ribosomal ITS sequences and plant phylogenetic inference // Molec. Phylogen. Evol. Vol. 29, iss. 3. P. 417–434. https://doi.org/10.1016/S1055-7903(03)00208-2

Backlund A., Bremer K. 1998. To be or not to be — principles of classification and monotypic plant families // Taxon. Vol. 47, № 2. P. 391–400. https://doi.org/10.2307/1223768

Bailey C. D., Carr T. G., Harris S. A., Hughes C. E. 2003. Characterization of angiosperm nrDNA polymorphism, paralogy, and pseudogenes // Molec. Phylogen. Evol. Vol. 29, iss. 3. P. 435–455. https://doi.org/10.1016/j.ympev.2003.08.021

Baldwin B. G., Sanderson M. J., Porter J. M., Wojciechowski M. F., Campbell Ch. S., Donoghue M. J. 1995. The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny // Ann. Missouri Bot. Gard. Vol. 82, № 2. P. 247–277. https://doi.org/10.2307/2399880

Barraclough T. G., Humphreys A. M. 2015. The evolutionary reality of species and higher taxa in plants: a survey of post-modern opinion and evidence // New Phytol. Vol. 207, № 2. P. 291–296. https://doi.org/10.1111/nph.13232

Bayly M. J., Ladiges P. Y. 2007. Divergent paralogues of ribosomal DNA in eucalypts (Myrtaceae) // Molec. Phylogen. Evol. Vol. 44, iss. 1. P. 346–356. https://doi.org/10.1016/j.ympev.2006.10.027

Bentham G. 1861. On the species and genera of plants, considered with reference to the practical application to systematic botany // The Natural History Review. New ser. Vol. 1, № 2. P. 133–151.

Bentham G., Hooker J. D. 1880. Genera Plantarum. Vol. 3, ps. 1. Londini: L. Reeve & Co. vii + 459 p. https://doi.org/10.5962/bhl.title.747

Bergius P. J. 1767. Descriptiones plantarum ex Capite Bonae Spei, cum differentiis specificis, nominibus trivialibus, et synonymis auctorum justis. Stockholmiae: Laur. Salvii. xxxvi + 360 p.

Boissier P. E. 1879. Flora Orientalis sive Enumeratio plantarum in Oriente, a Graecia et Aegypto ad Indiae fines hucusque observatarum. Vol. 4, fasc. 2. Genevae; Basileae: H. Georg. P. 281–1276. https://doi.org/10.5962/bhl.title.20323

Borodina A. E. 1989. Polygonaceae Juss. // Rasteniya Tsentralnoi Azii: Po materialam Botanicheskogo Instituta imeni V. L. Komarova (Plantae Asiae Centralis (secus materies Instituti botanici nomine V. L. Komarovii)) / V. I. Grubov (Ed.-in-Chief). Fasc. 9: Salicaceae — Polygonaceae. Leningrad: Nauka. P. 77–129. [In Russian] (Бородина А. Е. 1989. Polygonaceae Juss. // Растения Центральной Азии: По материалам Ботанического института имени В. Л. Комарова / Отв. ред. В. И. Грубов. Вып. 9: Ивовые — Гречишные. Л.: Наука. С. 77–129).

Brandbyge J. 1993. Polygonaceae // The families and genera of vascular plants. Vol. 2: Flowering plants — Dicotyledons / K. Kubitzki, J. G. Rohwer, V. Bittrich (eds.). Berlin: Springer-Verlag. P. 531–544. https://doi.org/10.1007/978-3-662-02899-5_63

Brockington S. F., Mavrodiev E. V., Ramdial J., Dhingra A., Soltis P. S., Soltis D. E. 2008. Keep the DNA rolling: multiple displacement amplification of archival plant DNA extracts // Taxon. Vol. 57, № 3. P. 944–948. https://doi.org/10.1002/tax.573022

Buckler E. S., Holtsford T. P. 1996. Zea ribosomal repeat evolution and substitution patterns // Molec. Biol. Evol. Vol. 13, № 4. P. 623–632. https://doi.org/10.1093/oxfordjournals.molbev.a025622

Buckler E. S., Ippolito A., Holtsford T. P. 1997. The evolution of ribosomal DNA divergent paralogues and phylogenetic implication // Genetics. Vol. 145, № 3. P. 821–832.

Coleman A. W. 2003. ITS2 is a double-edged tool for eukaryote evolutionary comparisons // Trends in Genetics. Vol. 19, № 7. P. 370–375. https://doi.org/10.1016/S0168-9525(03)00118-5

Coleman A. W. 2007. Pan-eukaryote ITS2 homologies revealed by RNA secondary structure // Nucl. Acids Res. Vol. 35, № 10. P. 3322–3329. https://doi.org/10.1093/nar/gkm233

Crespo M. B., Martinez-Azorin M., Mavrodiev E. V. 2015. Can a rainbow consist of a single colour? A new comprehensive generic arrangement of the ‘Iris sensu latissimo’ clade (Iridaceae), congruent with morphology and molecular data // Phytotaxa. Vol. 232. P. 1–78. https://doi.org/10.11646/phytotaxa.232.1.1

Czukavina A. P. 1962. Kustarnichkovyye vidy roda Polygonum iz Tadzhikistana [Undershrub species of the genus Polygonum from Tajikistan] // Izv. Akad. Nauk Tadzhiksk. SSR. Otd. biol. nauk. Vol. 2, № 9. P. 62–68. [In Russian] (Чукавина А. П. 1962. Кустарничковые виды рода Polygonum из Таджикистана // Изв. Акад. наук ТаджССР. Отд. биол. наук. Т. 2, № 9. C. 62–68).

Czukavina A. P. 1968. Rod Kurchavka, Kolyuchaya grecha — Atraphaxis L. Rod Gorets — Polygonum L. [Genus Goat’s-Wheat — Atraphaxis L. Genus Knotweed — Polygonum L.] // Flora Tadzhikskoi SSR. T. 3 / P. N. Ovchinnikov (ed.-in-chief). Leningrad: Nauka. P. 216–224; 242–306. [In Russian] (Чукавина А. П. 1968. Род Курчавка, Колючая греча — Atraphaxis L. Род Горец — Polygonum L. // Флора Таджикской ССР. Т. 3: Ореховые — Гвоздичные) / главн. ред. П. Н. Овчинников. Л.: Наука. С. 216–224; 242–306).

Dammer U. 1893. Polygonaceae // Die natürlichen Pflanzenfamilien / A. Engler, K. Prantl (eds.). Teil 3, Abt. 1a. Leipzig: W. Engelmann. S. 1–36. https://doi.org/10.5962/bhl.title.4635

Degnan J. H., Rosenberg N. A. 2009. Gene tree discordance, phylogenetic inference and the multispecies coalescent // Trends Ecol. Evol. Vol. 24, № 6. P. 332–340. https://doi.org/10.1016/j.tree.2009.01.009

Denduangboripant J., Cronk Q. C. 2001. Evolution and alignment of the hypervariable arm 1 of Aeschynanthus (Gesneriaceae) ITS2 nuclear ribosomal DNA // Molec. Phylogen. Evol. Vol. 20, iss. 2. P. 163–172. https://doi.org/10.1006/mpev.2001.0968

Doyle J. J. 1992. Gene trees and species trees: molecular systematics as one-character taxonomy // Syst. Bot. Vol. 17. P. 144–163. https://doi.org/10.2307/2419070

Edger P. P., Tang M., Bird K. A., Mayfield D. R., Conant G., Mummenhoff K., Koch M. A., Pires J. C. 2014. Secondary structure analyses of the nuclear rRNA internal transcribed spacers and assessment of its phylogenetic utility across the Brassicaceae (Mustards) // PLOS One. Vol. 9, № 7. P. e101341. https://doi.org/10.1371/journal.pone.0101341

Entwisle T. J., Weston P. H. 2005. Majority rules, when systematists disagree // Austral. Syst. Bot. Vol. 18, № 1. P. 1–6. https://doi.org/10.1071/SB04013

Fehrer J., Gemeinholzer B., Chrtek Jr. J., Bräutigam S. 2007. Incongruent plastid and nuclear DNA phylogenies reveal ancient intergeneric hybridisation in Pilosella hawkweeds (Hieracium, Cichorieae, Asteraceae) // Molec. Phylogen. Evol. Vol. 42, iss. 2. P. 347–361. https://doi.org/10.1016/j.ympev.2006.07.004

Feliner G. N., Rosselló J. A. 2007. Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants // Molec. Phylogen. Evol. Vol. 44, iss. 2. P. 911–919. https://doi.org/10.1016/j.ympev.2007.01.013

Freeman C. C. 2005. Polygonella Michx. // Flora of North America North of Mexico. Vol. 5 / Flora of North America Editorial Committee (eds.). New York; Oxford: Oxford Univ. Press. P. 534–540.

Galasso G., Banfi E., De Mattia F., Grassi F., Sgorbati S., Labra M. 2009. Molecular phylogeny of Polygonum L. s. l. (Polygonoideae, Polygonaceae), focusing on European taxa: preliminary results and systematic considerations based on rbcL plastidial sequence data // Atti Soc. Ital. Sci. Nat. Mus. Civico Storia Nat. Milano. Vol. 150. P. 113–148.

Giribet G., Hormiga G., Edgecombe G. D. 2016. The meaning of categorical ranks in evolutionary biology // Organisms Diversity Evol. Vol. 16, № 3. P. 427–430. https://doi.org/10.1007/s13127-016-0263-9

Giudicelli G. C., Mäder G., Silva-Arias G. A., Zamberlan P. M., Bonatto S. L., Freitas L. B. 2017. Secondary structure of nrDNA Internal Transcribed Spacers as a useful tool to align highly divergent species in phylogenetic studies // Genet. Molec. Biol. Vol. 40, № 1. P. 191–199. https://doi.org/10.1590/1678-4685-gmb-2016-0042

Goertzen L. R., Cannone J. J., Gutell R. R., Jansen R. K. 2003. ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae // Molec. Phylogen. Evol. Vol. 29, iss. 2. P. 216–234. https://doi.org/10.1016/S1055-7903(03)00094-0

Gottschling M., Hilger H. H., Wolf M., Diane N. 2001. Secondary structure of the ITS1 transcript and its application in a reconstruction of the phylogeny of Boraginales // Pl. Biol. (Stuttgart). Vol. 3, № 6. P. 629–636. https://doi.org/10.1055/s-2001-19371

Greene E. L. 1904. Certain Polygonaceous genera // Leaflets of botanical observation and criticism. Vol. 1. Washington, D. C. P. 17–50.

Hall T. A. 1999. BioEdit: a user-friendly biological sequence editor alignment and analysis program for Windows 95/98/NT // Nucleic Acids Symp. Ser. Vol. 41. P. 95–98.

Hara H., Chater A. O., Williams L. H. J. 1982. An enumeration of the flowering plants of Nepal. Vol. 3. London: British Museum (Natural History). 854 p.

Haraldson K. 1978. Anatomy and taxonomy in Polygonaceae subfam. Polygonoideae Meisn. emend. Jaretzky // Acta Univ. Upsal., Symb. Bot. Upsal. Vol. 22, № 2. P. 1–95.

Harpke D., Peterson A. 2006. Non-concerted ITS evolution in Mammillaria (Cactaceae) // Molec. Phylogen. Evol. Vol. 41, iss. 3. P. 579–593. https://doi.org/10.1016/j.ympev.2006.05.036

Hauenschild F. A., Favre G., Salazar A., Muellner-Riehl A. N. 2016. Phylogenetic relationships within the cosmopolitan buckthorn family (Rhamnaceae) support the resurrection of Sarcomphalus and the description of Pseudoziziphus gen. nov. // Taxon. Vol. 65, № 1. P. 47–64. https://doi.org/10.12705/651.4

Hedberg O. 1946. Pollen morphology in the genus Polygonum L. s. l. and its taxonomical significance // Svensk Bot. Tidskr. Vol. 40, № 4. P. 371–404.

Hennig W. 1966. Phylogenetic systematics. Urbana: Illinois Univ. Press. 263 p.

Holder M. T., Anderson J. A., Holloway A. K. 2001. Difficulties in detecting hybridization // Syst. Biol. Vol. 50, № 6. P. 978–982. https://doi.org/10.1080/106351501753462911

Hong S.-P., Oh I.-C., Ronse De Craene L.-P. 2005. Pollen morphology of the genera Polygonum s. str. and Polygonella (Polygoneae: Polygonaceae) // Pl. Syst. Evol. Vol. 254, № 1–2. P. 13–30. https://doi.org/10.1007/s00606-005-0334-4

Horton J. H. 1963. A taxonomic revision of Polygonella (Polygonaceae) // Brittonia. Vol. 15, № 3. P. 177–203. https://doi.org/10.2307/2805159

Hughes C. E., Bailey C. D., Harris S. A. 2002. Divergent and reticulate species relationships in Leucaena (Fabaceae) inferred from multiple data sources: insights into polyploid origins and nrDNA polymorphism // Amer. J. Bot. Vol. 89, № 7. P. 1057–1073. https://doi.org/10.3732/ajb.89.7.1057

Humphreys A. M., Linder H. P. 2009. Concept versus data in delimitation of plant genera // Taxon. Vol. 58, № 4. P. 1054–1074. https://doi.org/10.1002/tax.584002

Jaretzky R. 1925. Beiträge zur Systematik der Polygonaceae unter Berücksichtigung des Oxymethylanthrachinon-Vorkommens // Feddes Repert. Spec. Nov. Regni Veg. Vol. 22, № 4–12. P. 49–83. https://doi.org/10.1002/fedr.19250220402

Katoh K., Misawa K., Kuma K., Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast fourier transform // Nucl. Acids Res. Vol. 30, № 14. P. 3059–3066. https://doi.org/10.1093/nar/gkf436

Katoh K., Standley D. M. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability // Molec. Biol. Evol. Vol. 30, № 4. P. 772–780. https://doi.org/10.1093/molbev/mst010

Kimura M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences // J. Molec. Evol. Vol. 16. P. 111–120. https://doi.org/10.1007/BF01731581

Komarov V. L. 1936. Rod Gorets — Polygonum L. [Genus Knotweed — Polygonum L.] // Flora URSS / V. L. Komarov (red. princip.). Vol. 5. Mosqua; Leningrad: Acad. Sci. URSS. P. 594–701; 717–726. [In Russian] (Комаров В. Л. 1936. Род Горец — Polygonum L. // Флора СССР / отв. ред. В. Л. Комаров. Т. 5. М.; Л.: Изд-во АН СССР. С. 594–701; 717–726).

Korovin E. P. 1962. Rastitelnost Srednei Azii i Yuzhnogo Kazakhstana [Vegetation of Central Asia and Southern Kazakhstan]. 2nd ed. Vol. 2. Tashkent: Acad. Sci. Uzbeksk. SSR. 547 p. [In Russian] (Коровин Е. П. 1962. Растительность Средней Азии и Южного Казахстана. 2-е изд. Кн. 2. Ташкент: Изд-во Акад. наук УзССР. 547 с.).

Lazkov G. A., Umralina A. R. 2015. Endemic and rare plant species of Kyrgyzstan (Atlas). Ankara: FAO. 238 p. (Лазьков Г. А., Умралина А. Р. 2015. Эндемики и редкие виды растений Кыргызстана (Атлас). Анкара: ФАО. 238 с.).

Li A. J., Grabovskaya-Borodina A. E., Hong S.-P., McNeill J., Ohba H., Park C.-W. 2003. Polygonum Linnaeus // Flora of China / A. J. Li (ed.-in-chief). Vol. 5 / Z. Y. Wu, P. H. Raven, D. Y. Hong (eds.). Beijing: Science Press; St. Louis: Missouri Botanical Garden Press. P. 278–315.

Linnaeus C. 1753. Species plantarum. Т. 1. Holmiae: L. Salvius. 560 p. https://doi.org/10.5962/bhl.title.37656

Liu J. S., Schardl C. L. 1994. A conserved sequence in internal transcribed spacer 1 of plant nuclear rRNA genes // Pl. Molec. Biol. Vol. 26, № 2. P. 775–778.

Low S. L., Wong S. Y., Boyce P. C. 2018. Naming the chaos: generic redelimitation in Schismatoglottideae (Araceae) // Webbia. Vol. 73, № 1. P. 1–100. https://doi.org/10.1080/00837792.2017.1409940

Mai J. C., Coleman A. W. 1997. The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants // J. Molec. Evol. Vol. 44, № 3. P. 258–271. https://doi.org/10.1007/PL00006143

Mallet J., Besansky N., Hahn M. W. 2016. How reticulated are species? // BioEssays. Vol. 38, № 2. P. 140–149. https://doi.org/10.1002/bies.201500149

Mavrodiev E. V., Martinez-Azorin M., Dranishnikov P., Crespo M. B. 2014. At least 23 genera instead of one: the case of Iris L. s. l. (Iridaceae) // PLOS One. Vol. 9, № 8. P. e106459. https://doi.org/10.1371/journal.pone.0106459

Mavrodiev E. V., Yurtseva O. V. 2017. “A character does not make a genus, but the genus makes the character”: three-taxon statement analysis and intuitive taxonomy // Europ. J. Taxon. Vol. 377. P. 1–7. https://doi.org/10.5852/ejt.2017.377

Mayol M., Rosselloó J. A. 2001. Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus // Molec. Phylogen. Evol. Vol. 19, iss. 2. P. 167–176. https://doi.org/10.1006/mpev.2001.0934

Meisner C. F. 1826. Monographiae generic Polygoni prodromus. Genevae: A. Lador. 117 p. https://doi.org/10.5962/bhl.title.51543

Meisner C. F. 1857. Ordo Polygonaceae // Prodromus systematis naturalis regni vegetabilis / A. de Candolle (ed.). Ps. 14. Parisiis: V. Masson. P. 1–186. https://doi.org/10.5962/bhl.title.286

Michaux A. 1803. Flora boreali-americana. T. 1. Parisiis; Argentorati: Levrault. 340 p. https://doi.org/10.5962/bhl.title.330

Milyutina I. A., Goryunov D. V., Ignatov M. S., Ignatova E. A., Troitsky A. V. 2010. The phylogeny of Schistidium (Bryophyta, Grimmiaceae) based on the primary and secondary structure of nuclear rDNA internal transcribed spacers // Molec. Biol. Vol. 44, № 6. P. 883–897. https://doi.org/10.1134/S0026893310060051

Nowak A., Nobis M. 2010. Tentative list of endemic vascular plants of Zeravshan Mts in Tajikistan (Middle Asia): distribution, habitat preferences and conservation status of species // Biodiv. Res. Conserv. Vol. 19. P. 65–80. https://doi.org/10.2478/v10119-010-0011-5

Nowak A., Nowak S., Nobis M. 2011. Distribution patterns, ecological characteristic and conservation status of endemic plants of Tadzhikistan — A global hotspot of diversity // J. Nat. Conserv. Vol. 19. P. 296–305. https://doi.org/10.1016/j.jnc.2011.05.003

Ochieng J. W., Henry R. J., Baverstock P. R., Steane D. A., Shepherd M. 2007. Nuclear ribosomal pseudogenes resolve a corroborated monophyly of the eucalypt genus Corymbia despite misleading hypotheses at functional ITS paralogs // Molec. Phylogen. Evol. Vol. 44, iss. 2. P. 752–764. https://doi.org/10.1016/j.ympev.2007.04.017

Orthia L. A., Cook L. G., Crisp M. D. 2005. Generic delimitation and phylogenetic uncertainty: an example from a group that has undergone an explosive radiation // Austral. Syst. Bot. Vol. 18, № 1. P. 41–47. https://doi.org/10.1071/SB04016

Pavlov V. N. 1980. Rastitel’nyi pokrov Zapadnogo Tyan-Shanya [Vegetation of the Western Tien Shan]. Moscow: MGU. 248 p. [In Russian] (Павлов В. Н. 1980. Растительный покров Западного Тянь-Шаня. Москва: МГУ. 248 с.)

Pfeil B. E., Crisp M. D. 2005. What to do with Hibiscus? A proposed nomenclatural resolution for a large and well known genus of Malvaceae and comments on paraphyly // Austral. Syst. Bot. Vol. 18, № 1. P. 49–60. https://doi.org/10.1071/SB04024

Poczai P., Hyvönen J. 2010. Nuclear ribosomal spacer regions in plant phylogenetics: problems and prospects // Molec. Biol. Rep. Vol. 37, № 4. P. 1897–1912. https://doi.org/10.1007/s11033-009-9630-3

Rieseberg L. H., Soltis D. E. 1991. Phylogenetic consequences of cytoplasmic gene flow in plants // Evol. Trends Pl. Vol. 5, № 1. P. 65–84.

Rieseberg L. H., Whitton J., Linder C. R. 1996. Molecular marker incongruence in plant hybrid zones and phylogenetic trees // Acta Bot. Neerl. Vol. 45, № 3. P. 243–262. https://doi.org/10.1111/j.1438-8677.1996.tb00515.x

Roberty G., Vautier S. 1964. Les genres de Polygonacees // Boissiera. Vol. 10. P. 7–128.

[Ronse De Craene] Ronse DeCraene L.-P., Akeroyd J. R. 1988. Generic limits in Polygonum and related genera (Polygonaceae) on the basis of floral characters // Bot. J. Linn. Soc. Vol. 98, № 4. P. 321–371. https://doi.org/10.1111/j.1095-8339.1988.tb01706.x

Ronse De Craene L.-P., Hong S.-P., Smets E. F. 2004. What is the taxonomic status of Polygonella? Evidence from floral morphology // Ann. Missouri Bot. Gard. Vol. 91, № 2. P. 320–345.

Safarov N. M. 2013. Geographical analysis of the flora of the Central Pamir-Alai // Dokl. Akad. Nauk Respubl. Tajikistan (Rep. Acad. Sci. Republ. Tajikistan). Vol. 56, № 7. P. 569–573. [In Russian with English summary] (Сафаров Н. М. Географический анализ флоры Центрального Памиро-Алая // Докл. Акад. наук Республ. Таджикистан. Т. 56, № 7. С. 569–573.)

Sanchez A., Schuster T. M., Burke J. M., Kron K. A. 2011. Taxonomy of Polygonoideae (Polygonaceae): a new tribal classification // Taxon. Vol. 60, № 1. P. 151–160. https://doi.org/10.1002/tax.601013

Schuster T. M., Wilson K. L., Kron K. A. 2011a. Phylogenetic relationships of Muehlenbeckia, Fallopia, and Reynoutria (Polygonaceae) investigated with chloroplast and nuclear sequence data // Int. J. Pl. Sci. Vol. 172, № 8. P. 1053–1066. https://doi.org/10.1086/661293

Schuster T. M., Reveal J. L., Kron K. A. 2011b. Phylogeny of Polygoneae (Polygonaceae: Polygonoideae) // Taxon. Vol. 60, № 6. P. 1653–1666. https://doi.org/10.1002/tax.606010

Schuster T. M., Reveal J. L., Bayly M. J., Kron K. A. 2015. An updated molecular phylogeny of Polygonoideae (Polygonaceae): Relationships of Oxygonum, Pteroxygonum, and Rumex, and a new circumscription of Koenigia // Taxon. Vol. 64, № 6. P. 1188–1208. https://doi.org/10.12705/646.5

Shaw J., Lickey E. B., Schilling E. E., Small R. L. 2007. Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III // Amer. J. Bot. Vol. 94, № 2. P. 275–288. https://doi.org/10.3732/ajb.94.3.275

Soltis D. E., Kuzoff R. K. 1995. Discordance between nuclear and chloroplast phylogenies in the Heuchera group (Saxifragaceae) // Evolution.Vol. 49, № 4. P. 727–742. https://doi.org/10.1111/j.1558-5646.1995.tb02309.x

Soltis D. E., Soltis P. S., Endress P., Chase M. W., Manchester S., Judd W., Majure L., Mavrodiev E. V. 2018. Phylogeny and evolution of the angiosperms. Rev. a. upd. ed. Chicago: Univ. Chicago Press. P. 1–579.

Stevens P. F. 1985. The genus concept in practice: But for what practice? // Kew Bull. Vol. 40, № 3. P. 457–465. https://doi.org/10.2307/4109605

Stevens P. F. 2001 onwards. Angiosperm Phylogeny Website. Version 14. July 2017 [continiously updated since]. http://www.mobot.org/MOBOT/research/APweb/ (Accessed July 2017).

Stevens P. F. 2002. Why do we name organisms? Some reminders from the past // Taxon. Vol. 51, № 1. P. 11–26. https://doi.org/10.2307/1554959

Taberlet P., Gielly L., Pautou G., Bouvet J. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA // Pl. Molec. Biol. Vol. 17, iss. 5. P. 1105–1109. https://doi.org/10.1007/BF00037152

Takhtajan A. 1986. Floristic regions of the world / transl. by T. J. Crovello. Berkeley; Los Angeles (CA): Univ. California Press. P. 1–522.

Tamura K., Stecher G., Peterson D., Filipski A., Kumar S. 2013. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0 // Molec. Biol. Evol. Vol. 30, iss. 12. P. 2725–2729. https://doi.org/10.1093/molbev/mst197

Tavakkoli S., Kazempour Osaloo S., Mozaffarian V., Maassoumi A. A. 2015. Molecular phylogeny of Atraphaxis and the woody Polygonum species (Polygonaceae): taxonomic implications based on molecular and morphological evidence // Pl. Syst. Evol. Vol. 301, № 4. P. 1157–1170. https://doi.org/10.1007/s00606-014-1140-7

Tippery N. P., Les D. H. 2008. Phylogenetic analysis of the internal transcribed spacer (ITS) region in Menyanthaceae using predicted secondary structure // Molec. Phylogen. Evol. Vol. 49, iss. 2. P. 526–537. https://doi.org/10.1016/j.ympev.2008.07.019

Tzvelev N. N. 1987. Notulae de Polygonaceis in flora Orientis Extremi // Novosti Sist. Vyssh. Rast. Vol. 24. P. 72–79. [In Russian] (Цвелёв Н. Н. 1987. Заметки о Polygonaceae во флоре Дальнего Востока // Новости сист. высш. раст. Т. 24. С. 72–79).

Van der Auwera G., Chapelle S. R., De Wächter R. 1994. Structure of the large ribosomal subunit RNA of Phytophthora megasperma, and phylogeny of the oomycetes // FEBS Letters. Vol. 338, № 2. P. 133–136. https://doi.org/10.1016/0014-5793(94)80350-1

Voylokova V. N., Yurtseva O. V., Bobrova V. K., Troitskiy A. V. 2009. Morphological and molecular evidences of hybrid origin of Polygonum aschersonianum and P. samarense (Polygonaceae) // Bot. Zhurn. Vol. 94, № 2. P. 161–187. [In Russian] (Войлокова В. Н., Юрцева О. В., Боброва В. К., Троицкий А. В. 2009. Морфологические и молекулярные доказательства гибридного происхождения Polygonum aschersonianum и P. samarense (Polygonaceae) // Бот. журн. Т. 94, № 2. С. 161–187).

Wang S., Bao Z., Li N., Zhang L., Hu J. 2007. Analysis of the secondary structure of ITS1 in Pectinidae: implications for phylogenetic reconstruction and structural evolution // Mar. Biotechnol. Vol. 9, № 2. P. 231–242. https://doi.org/10.1007/s10126-006-6113-6

Watson S. 1873. On section Avicularia of the genus Polygonum // Amer. Naturalist. Vol. 7. P. 662–665.

Wen J., Zimmer E. A. 1996. Phylogeny and biogeography of Panax L. (the ginseng genus, Araliaceae): inferences from ITS sequences of nuclear ribosomal DNA // Molec. Phylogen. Evol. Vol. 6, № 2. P. 167–177. https://doi.org/10.1006/mpev.1996.0069

Wendel J. F., Doyle J. J. 1998. Phylogenetic incongruence: Window into genome history and molecular evolution // Molecular Systematics of Plants II / D. E. Soltis, P. S. Soltis, J. J. Doyle (eds.). Boston: Springer. P. 265–296.

Wheeler Q. D., Platnick N. I. 2000. The phylogenetic species concept (sensu Wheeler and Platnick) // Species concepts and phylogenetic theory: a debate / Q. D. Wheeler, R. Meier (eds.). New York: Columbia Univ. Press. P. 55–69.

White T. J., Bruns T., Lee S., Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetic // PCR Protocols: a guide to Methods and Application / M. A. Innis, D. H. Gelfand, J. J. Sninsky, T. J. White (eds.). New York: Acad. Press. Vol. 18, № 1. P. 315–322.

Yang C. Y. 1983. Polygonum tianschanicum Chang Y. Yang // J. Aug. 1st Agric. Coll. Xinjiang. Vol. 4. P. 55.

Yang C. Y. 2010. Sylva Xinjiangensis. Beijing: China Forestry Publ. House. 566 p.

Yurtseva O. V., Bobrova V. K., Voylokova V. N., Troitsky A. V., Kramina T. E. 2006. Morphological variability and genetic polymorphism of Polygonum aviculare group (Polygonaceae) // Bot. Zhurn. Vol. 91, № 5. P. 697–716. [In Russian] (Юрцева О. В., Боброва В. К., Войлокова В. Н., Троицкий А. В., Крамина Т. Е. 2006. Морфологическая изменчивость и генетический полиморфизм видов родства Polygonum aviculare (Polygonaceae) // Бот. журн. Т. 91, № 5. С. 697–716).

Yurtseva O. V., Troitsky A. V., Bobrova V. K., Voylokova V. N. 2010. On taxonomical revision of Polygonum s. str. (Polygonaceae): phylogenetic and morphological data // Bot. Zhurn. Vol. 95, № 2. P. 226–247. [In Russian] (Юрцева О. В., Троицкий А. В., Боброва В. К., Войлокова В. Н. 2010. К ревизии системы рода Polygonum s. str. (Polygonaceae): молекулярные и морфологические данные // Бот. журн. Т. 95, № 2. С. 226–247).

Yurtseva O. V., Levina M. S., Severova E. E., Troitsky A. V. 2012a. Morphology and taxonomy of Polygonum cognatum Meisn., P. alpestre C. A. Mey. and allied taxa from Central Asia and the Caucasus (Polygonaceae) // Wulfenia. Vol. 19. P. 141–180.

Yurtseva O. V., Kuznetsova O. I., Severova E. E., Troitsky A. V. 2012b. Taxonomy and morphology of Atraphaxis (Polygoneae, Polygonaceae) // Caryophyllales: new insights into the phylogeny, systematics and morphological evolution of the order: Proc. Symp. held on 24–27 September 2012 at Moscow M. V. Lomonosov State University / A. K. Timonin, A. P. Sukhorukov, G. H. Harper, M. V. Nilova (eds.). Tula: Grif & Co. P. 114–118.

Yurtseva O. V., Severova E. E., Bovina I. Yu. 2014. Pollen morphology and taxonomy of Atraphaxis (Polygoneae, Polygonaceae) // Pl. Syst. Evol. Vol. 300, № 4. P. 749–766. https://doi.org/10.1007/s00606-013-0917-4

Yurtseva O. V., Kuznetsova O. I., Mavrodieva M. E., Mavrodiev E. V. 2016. What is Atraphaxis L. (Polygonaceae, Polygoneae): cryptic taxa and resolved taxonomic complexity instead of the formal lumping and the lack of morphological synapomorphies // PeerJ. Vol. 4 (e1977). P. 1–50. https://doi.org/10.7717/peerj.1977

Yurtseva O. V., Severova E. E., Mavrodiev E. V. 2017. Persepolium (Polygoneae): A new genus in Polygonaceae based on conventional Maximum Parsimony and Three-taxon statement analyses of a comprehensive morphological dataset // Phytotaxa. Vol. 314, № 2. P. 151–194. https://doi.org/10.11646/phytotaxa.314.2.1

Yurtseva O. V., Lazkov G. A., Ukrainskaja U. A., Deviatov A. G. 2019. Caelestium (Polygonaceae, Polygoneae), the newly established genus supported by evidence from morphology // Novosti Sist. Vyssh. Rast. Vol. 50. P. 80–100. (Юрцева О. В., Лазьков Г. А., Украинская У. A., Девятов А. Г. 2019. Caelestium (Polygonaceae, Polygoneae): морфологические основания // Новости сист. высш. раст. Т. 50. С. 80–100). https://doi.org/10.31111/novitates/2019.50.80

Zheng X., Cai D., Yao L., Teng Y. 2008. Non-concerted ITS evolution, early origin and phylogenetic utility of ITS pseudogenes in Pyrus // Molec. Phylogen. Evol. Vol. 48, № 3. P. 892–903. https://doi.org/10.1016/j.ympev.2008.05.039

Zuker M. 2003. Mfold web server for nucleic acid folding and hybridization prediction // Nucl. Acids Res. Vol. 31, № 13. P. 3406–3415. https://doi.org/10.1093/nar/gkg595